• Blue Lagoon - Blue Lagoon – Comino

This private boat tour in Malta includes a visit to the renowned Blue Lagoon in Comino, celebrated as one of the most breathtaking swimming locations in the Maltese islands. The lagoon is famous for its stunningly clear turquoise waters and bright sandy seabed, making it a highlight of any private boat trip to Comino.

At the Blue Lagoon, guests can swim directly from the boat using the swim ladder, or choose to explore the lagoon from the small beach area. The water is shallow, calm, and ideal for a relaxing sea experience.

Snorkel masks are available on board, allowing guests to snorkel and explore the crystal-clear waters around the lagoon. The excellent visibility offers a great opportunity to observe the seabed and marine life.

The skipper typically anchors the boat away from the busiest parts of the Blue Lagoon, enabling guests to enjoy swimming and relaxing in the clear blue waters, away from the crowds, during their private boat tour in Malta.

• Crystal Lagoon - Crystal Lagoon – Comino

Crystal Lagoon is one of the most spectacular spots around Comino and a highlight of many private boat tours in Malta. Surrounded by dramatic cliffs and natural caves, this beautiful lagoon is known for its incredibly clear turquoise and deep blue waters.

During the stop at Crystal Lagoon, guests can swim directly from the boat, snorkel in the crystal-clear waters, or simply relax and enjoy the stunning scenery around the lagoon. Snorkel masks are provided on board, making it easy to explore the rocky seabed and marine life below.

Crystal Lagoon is also famous for its caves and rock formations, which are explored by boat when sea conditions permit. The cliffs surrounding the lagoon create calm and sheltered waters, making it a perfect location for swimming during a private boat trip to Comino.

Being less crowded than the Blue Lagoon, Crystal Lagoon often feels more relaxed while still offering some of the clearest blue waters in Malta.

• Santa Marija Bay - Santa Marija Bay – Comino

Santa Marija Bay is one of the most tranquil beaches on Comino and a beautiful stop during a private boat tour in Malta. Located on the quieter side of the island, this bay is known for its soft white sand, crystal-clear waters, and relaxed atmosphere away from the busy areas.

The bay is especially ideal for families with children because the water near the beach is shallow and calm. Guests can swim directly from the boat or go onto the beach to enjoy the sandy shoreline and gentle waters.

Compared to the Blue Lagoon, Santa Marija Bay is usually much less crowded, making it a great place to relax, swim, and enjoy the natural beauty of Comino during a private boat trip to Comino.

The clear blue waters and sandy seabed also make it a nice location for snorkeling and for families who want to enjoy a quieter swimming stop away from the crowds.

• St. Mary’s Tower - Santa Marija Tower – Comino Tower

During this private boat tour in Malta, the historic Santa Marija Tower, also known as the Comino Tower, is a notable landmark on the island. The tower sits high on the cliffs of Comino and offers a beautiful view from the sea, making it a great spot for photos during a private boat trip to Comino.

This historic watchtower was built in the 17th century and stands above the famous Lovers Cave of Comino, which lies just below the cliffs. The contrast between the historic stone tower, the rugged coastline, and the crystal-clear blue waters makes this area a beautiful highlight while exploring Comino by private boat.

• Hondoq Bay - Hondoq Bay – Gozo

During longer trips, such as the 4-hour private boat tour, a stop at Hondoq Bay, one of the most beautiful swimming spots on the southern coast of Gozo, may be included. The bay is known for its incredibly clear blue waters and peaceful atmosphere, making it a great place to relax and swim during a private boat trip around Comino and Gozo.

Guests can swim directly from the boat and enjoy the crystal-clear waters, which are also great for snorkeling. The rocky cliffs around the bay are popular for cliff diving for those who enjoy a bit of adventure.

Close to Hondoq Bay, there is also a hidden spot known as Bemberin Gorge, a small and secluded cove along the coastline. This natural gorge has beautiful blue waters and interesting rock formations, making it a fun place to explore by boat during the private boat tour.

• Santa Maria Caves - Santa Marija Caves – Comino

During this private boat tour in Malta, the Santa Marija Caves, one of the most impressive caves around Comino, are explored. These caves are located along the northeastern coastline of the island and are known for their dramatic rock formations, narrow openings, and incredibly clear blue waters.

The Santa Marija Caves consist of several sea caves naturally shaped by the sea over thousands of years. Some caves have wide entrances that allow the boat to enter, while others form small tunnels and hidden chambers along the cliffs.

Due to their location and the narrow entrances and shallow waters, some of these caves can only truly be explored during a private boat trip to Comino with experienced local skippers. The water inside the caves is extremely clear and bright blue, making the area perfect for photos, sightseeing, and enjoying the natural beauty of Comino’s coastline during a private boat tour.

• Gozo Ferry Port - Mġarr Harbour – Gozo

Mġarr Harbour is one of the most beautiful ports in the Maltese islands and serves as the main gateway to Gozo. The harbour is surrounded by clear blue waters and is easily recognized by the small church that sits on the hill overlooking the port, creating a very scenic view as you approach by boat.

The marina is often lined with traditional Maltese boats, fishing vessels, and sailing boats, giving the harbour a very authentic Mediterranean atmosphere. Mġarr Harbour is also the main connection between Gozo and Malta, making it an important lifeline for the island.

During longer private boat tours, such as the 4-hour private boat tour, parts of the harbour may be explored with the boat. This allows guests to see the port from the sea and capture some beautiful photos of the harbour, the surrounding hills, and the colourful boats that are often anchored along the marina.

• Island of Gozo - On longer private boat tours, such as the 4-hour private boat tour, parts of the beautiful coastline of Gozo may also be explored. This island is known for its rugged cliffs, clear blue waters, and many hidden swimming spots that are often much quieter than the more popular locations.

During a private boat trip around Comino and Gozo, some of the best areas along the coast are visited, including secluded coves and small beaches that can usually only be reached by boat. These peaceful locations are perfect for swimming and snorkeling in crystal-clear waters, away from the crowds.

Some of the smaller islands and rock formations just off the coast of Gozo, such as Halfa Rock and other small islets rich in marine life, may also be explored. These areas are often surrounded by damselfish and other Mediterranean species, making them excellent spots for snorkeling.

Exploring Gozo by private boat offers a completely different perspective of the island and its beautiful coastline.

• Comino - Comino Island

Comino is one of Malta’s most cherished islands, famous for its crystal-clear blue waters and unspoiled natural beauty. The island is very small and peaceful, with only one permanent resident, which helps preserve its unique character.

Comino is also home to two of the most famous swimming locations in Malta: the Blue Lagoon and the Crystal Lagoon. Both are known for their incredibly clear turquoise waters and are highlights of many private boat tours in Malta.

During this private boat trip to Comino, the island’s beautiful coastline is explored, including both the well-known locations and the quieter, hidden coves with clear blue waters away from the crowds.

Comino is also famous for its many sea caves, which are explored by boat when sea conditions allow. Along the way, stops are normally made at a few locations where guests can swim and snorkel in the crystal-clear waters, enjoying the natural beauty that makes Comino so special.

• Cominotto - Cominotto Island

During this private boat tour in Malta, Cominotto Island, a small island located just next to the famous Blue Lagoon in Comino, may also be explored. Cominotto can only truly be explored by private boat, as many of its best spots are only accessible from the sea.

The boat usually anchors just off the coast near the protected natural area, where guests can swim across to the secluded beach. The water surrounding Cominotto is incredibly clear and bright blue, making it a perfect location for swimming and snorkeling during a private boat trip to Comino.

The area is rich in marine life, and the rocky seabed attracts many species of Mediterranean fish, making it a great spot for snorkeling.

The beach itself also hides a small lagoon inside the rocks, along with a cave that opens out to the open sea. Surrounded by crystal-clear blue waters, Cominotto is one of the most beautiful hidden spots around Comino.

• Cominotto Reef - Cominotto Reef – North of Comino

During this private boat tour in Malta, the beautiful Cominotto Reef, located to the north of Comino Island near Cominotto, may also be explored. This area is known for its crystal-clear blue waters and is considered one of the best locations for snorkeling during a private boat trip to Comino.

The reef is rich in marine life, with many species of Mediterranean fish often seen swimming around the rocky seabed. The excellent visibility and vibrant colours of the water make this a fantastic location for snorkeling and underwater photography. It is also a great place for capturing action camera shots, and the area looks incredible in drone footage, especially with DJI drone views showing the deep blue waters surrounding the reef.

The surrounding cliffs are also home to several sea birds, including the Garnija.

Due to the shallow reefs and rocky formations, this area is best explored with experienced and qualified local skippers.

• Cirkewwa - Ċirkewwa Harbour – Departure Point

Ċirkewwa Harbour is where the private boat tour in Malta begins. Here, guests are welcomed on board by the skipper before the boat trip starts. Before departure, a few minutes are taken to explain the planned route for the day, depending on sea conditions and the interests of the guests.

Ċirkewwa is located on the northern tip of Malta and is known for its clear blue waters and beautiful coastal views. The harbour area is also a well-known spot for swimming, snorkeling, and diving thanks to its excellent visibility and clean Mediterranean waters.

From here, the private boat trip towards Comino begins, which is only a short distance away. The journey from Ċirkewwa to Comino usually takes around 10 minutes, allowing for a quick reach to the famous Blue Lagoon, Crystal Lagoon, and the caves around Comino.

This makes Ċirkewwa the perfect starting point for exploring Comino by private boat.

• San Niklaw Bay - San Niklaw Bay – Comino

During this private boat tour in Malta, San Niklaw Bay, a quiet and scenic cove on the north side of Comino, may also be visited. This bay is known for its clear blue waters and relaxed atmosphere, making it a great place to stop for swimming during a private boat trip to Comino.

Compared to the busy Blue Lagoon, San Niklaw Bay is usually much more peaceful, allowing guests to enjoy the natural beauty of Comino away from the crowds. The calm, crystal-clear waters make it ideal for swimming and snorkeling directly from the boat.

Nearby, there is also a hidden gorge along the coastline with interesting rock formations, small swim-through caves, and natural air pockets that can sometimes be explored in calm conditions.

San Niklaw Bay is also home to the historic Comino Hotel, which is set to be rebuilt in 2026. The eastern side of the bay is also known for octopus, especially around sunrise and sunset.

• P 31 Wreck - P31 Wreck – Crystal Lagoon

During this private boat tour in Malta, the famous P31 wreck, located near the Crystal Lagoon in Comino, may also be visited. This wreck was originally a World War II minesweeper that was later converted into a patrol boat before being intentionally scuttled to create an artificial reef.

Today, the wreck rests on a sandy seabed at a depth of around 12 to 18 metres, making it an excellent spot for snorkeling and free diving during a private boat trip to Comino. It is now surrounded by fish and marine life in the crystal-clear blue waters of the lagoon.

This area is perfect for guests who enjoy snorkeling or free diving, as the wreck is clearly visible in good conditions. If guests prefer to stay on board, they can still see the location from the boat and enjoy the beautiful blue waters around the Crystal Lagoon.

As with all stops during the private boat tour, this part of the route can be adjusted depending on the interests of the guests.

• Islet in the Comino - Comino Islets

During this private boat tour in Malta, the smaller islets around Comino are also explored. These rocky islands are surrounded by incredibly clear and deep blue waters and are known for their natural caves, hidden swimming spots, and untouched coastline.

Each of the Comino islets has its own character, with small caves and beautiful areas of crystal-clear waters that are perfect for swimming and snorkeling during a private boat trip to Comino. The colours of the waters around these islets are often some of the brightest blue in the Maltese islands.

Because these locations are surrounded by shallow rocks and narrow sections, many of them can only be explored properly by boat. This makes them a special part of a Blue Lagoon private boat tour, as larger boats cannot access many of these areas.

Exploring the Comino islets is a great way to discover hidden corners of the island, away from the crowds, while enjoying the clear waters and dramatic coastline.

• Qala - Qala Coast – Gozo

On longer trips, especially the 4-hour private boat tour, part of the beautiful Qala coastline in Gozo may also be explored. This area is much quieter than the busy locations around Comino and offers a more peaceful side of the islands. The coastline here is rugged and natural, with several hidden spots that can only be reached by boat, making the experience feel even more special.

The Qala coast is also rich in marine life and is a great place for snorkeling during a private boat trip around Comino and Gozo. The rocky seabed is often home to octopus, cuttlefish, seabream, and other Mediterranean fish.

In one section of the coast, there is also natural clay mud found on the rocks. This mud contains natural minerals that many people believe are beneficial for the skin. Some guests enjoy applying the mud before rinsing it off in the clear blue sea, before getting back on the boat and continuing the private boat tour.

• Alex’s Cave - Alex Cave – Smurfs Cave (Comino)

During this private boat tour in Malta, Alex Cave, also known locally as Smurfs Cave, may also be visited. This small but impressive cave is located on one of the Comino islets and is known for its deep blue waters and the large number of damselfish that are usually swimming around the entrance.

The waters here are very clear and have an intense blue colour, which makes it a beautiful spot for photos and snorkeling during a private boat trip to Comino. A type of red algae grows on the rocks inside the cave, and this natural colour contrast makes the blue waters appear even more vibrant.

Alex Cave is also interesting because the cave continues through the rock and connects across the island underneath, which makes it a popular site for diving and free diving. It is one of the hidden natural spots that local skippers like to show during a Comino caves exploration on a private boat tour.

• L-Ghar ta’ Bla Saqaf - L-Għar ta’ Bla Saqaf – Crystal Lagoon Cave (Popeye Cave)

During this private boat tour in Malta, L-Għar ta’ Bla Saqaf, a unique sea cave near the Crystal Lagoon also known as Popeye Cave or the Crystal Lagoon Cave, is visited. This cave is one of the most impressive natural caves around Comino.

The cave is famous for its open roof, which allows sunlight to enter from above and light up the waters with incredible shades of blue. The crystal-clear waters inside and around the cave make it one of the best places for snorkeling during a private boat trip to Comino.

It is also a fantastic location for photos, especially if using an action camera or underwater camera.

Inside the cave, there is a hidden rock formation known by local skippers as the Guardian of the Cave, so remember to ask the skipper to show it during the Comino caves exploration.

• L-imriek - L-Imriek

During this private boat tour in Malta, L-Imriek, a beautiful spot just off the Blue Lagoon area in Comino, may also be passed by. This location is well known for its incredible views and is one of the best places to capture photos of the Comino islands from the sea.

From here, Comino, Cominotto Island, and the smaller surrounding islets can often be seen perfectly lined up in the background. The historic Santa Marija Tower, also known as the Comino Tower, stands clearly on the island, creating a stunning natural backdrop. Right in the middle of this view, the famous Blue Lagoon, with its bright turquoise waters, stands out against the rocky coastline.

This area is perfect for photos during a private boat trip to Comino, especially when the sea is calm and the waters are crystal clear. The seabed here is also known for local marine life, and it is sometimes possible to spot species such as seabream, sargi, and even octopus in the clear Mediterranean waters.

• Paradise Bay - Paradise Bay – Malta

On longer private boat tours, Paradise Bay, a beautiful cove located near the northern coast of Malta, may also be explored. This bay is known for its incredibly clear blue waters, often compared to the colours of the famous Blue Lagoon.

Paradise Bay is a great place to stop for a swim during a private boat tour in Malta. Guests can swim directly from the boat and enjoy the calm, crystal-clear waters while surrounded by the natural cliffs of the bay.

Because the bay is slightly tucked away along the coastline, it creates a peaceful and scenic swimming spot. The bright turquoise waters and rocky surroundings also make it a lovely location for photos during a private boat trip around Comino and the north of Malta.

This stop is perfect for relaxing in the sea, enjoying the clear waters, and discovering another beautiful cove during the private boat experience.

• Elephant Head Rock - Elephant Head Rock – A unique natural rock formation on the coast of Comino that resembles the shape of an elephant’s head. The area was used as a filming location in The Count of Monte Cristo. During the tour, the boat sails past the rock and explores three nearby sea caves, where guests can enjoy the impressive coastal scenery and crystal-clear waters.

• Permits are included
• Use of snorkeling equipment
• Port and Marina fees are included
• Gratuities

• Fuel surcharge per boat, not per person. Paid in cash to the skipper after the tour – €99.

Escape the hustle and bustle and discover the Blue Lagoon as it was meant to be enjoyed — on a private boat crafted just for you.

Our tours are completely private, ensuring you won’t have to share the boat with anyone outside your group. Each journey is customized to suit your group, allowing you to explore at your leisure.

We offer more than just a visit to the Blue Lagoon — we ensure you experience it fully. Your skipper will anchor in the clearest turquoise waters, away from the crowded beach areas, allowing you to swim and snorkel in tranquility. During the trip, we explore hidden caves, striking rock formations, and stunning bays around Comino and nearby islands, providing numerous opportunities to swim and unwind.

Your local skipper will also share fascinating stories about the islands and is always ready to take photos for you, so you can concentrate on savoring the experience.

For those looking to explore the Blue Lagoon without the crowds, visit more locations, and enjoy a serene private experience, this is undoubtedly the best way to discover Comino by boat.

For a full refund, cancel at least 24 hours before the scheduled departure time.